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GEO accession:
Sample GSM249398
Query DataSets for GSM249398
Status
Public on Dec 14, 2007
Title
Foam cells from subject with atherosclerosis, pair J.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
61.2244
A
0.185131
AFFX-BioB-M_at
105.558
P
0.0336773
AFFX-BioB-3_at
50.341
P
0.0396608
AFFX-BioC-5_at
241.18
P
0.00401721
AFFX-BioC-3_at
111.606
P
0.000856509
AFFX-BioDn-5_at
101.78
P
0.0219019
AFFX-BioDn-3_at
1052.06
P
0.000445901
AFFX-CreX-5_at
1331.24
P
4.42873e-05
AFFX-CreX-3_at
2478.57
P
4.42873e-05
AFFX-DapX-5_at
14.538
A
0.327079
AFFX-DapX-M_at
15.1048
A
0.227636
AFFX-DapX-3_at
3.89002
A
0.868639
AFFX-LysX-5_at
2.48437
A
0.897835
AFFX-LysX-M_at
15.7337
A
0.5
AFFX-LysX-3_at
3.56993
A
0.559354
AFFX-PheX-5_at
3.89964
A
0.672921
AFFX-PheX-M_at
2.90114
A
0.957038
AFFX-PheX-3_at
6.49643
A
0.824672
AFFX-ThrX-5_at
5.20482
A
0.957038
AFFX-ThrX-M_at
14.4287
A
0.470241
Total number of rows:
22283
Table truncated, full table size
662 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249398.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
GSM249398.CHP.gz
6.3 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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