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GEO accession:
Sample GSM249400
Query DataSets for GSM249400
Status
Public on Dec 14, 2007
Title
Foam cells from subject without atherosclerosis, pair J.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject without atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
58.5343
M
0.0429619
AFFX-BioB-M_at
130.821
P
0.00141043
AFFX-BioB-3_at
74.9353
P
0.0032123
AFFX-BioC-5_at
232.448
P
0.000169227
AFFX-BioC-3_at
109.393
P
0.000126798
AFFX-BioDn-5_at
96.138
P
0.0103167
AFFX-BioDn-3_at
1027.63
P
0.000195116
AFFX-CreX-5_at
1174.88
P
4.42873e-05
AFFX-CreX-3_at
2070.44
P
4.42873e-05
AFFX-DapX-5_at
8.17554
A
0.227636
AFFX-DapX-M_at
19.6187
A
0.139482
AFFX-DapX-3_at
2.65485
A
0.897835
AFFX-LysX-5_at
2.8416
A
0.48511
AFFX-LysX-M_at
10.934
A
0.686277
AFFX-LysX-3_at
1.9939
A
0.645547
AFFX-PheX-5_at
6.26982
A
0.645547
AFFX-PheX-M_at
2.68898
A
0.824672
AFFX-PheX-3_at
6.80923
A
0.455413
AFFX-ThrX-5_at
2.7655
A
0.772364
AFFX-ThrX-M_at
1.78262
A
0.760937
Total number of rows:
22283
Table truncated, full table size
664 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249400.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249400.CHP.gz
5.8 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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