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GEO accession:
Sample GSM249405
Query DataSets for GSM249405
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair L.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
63.3581
A
0.0629293
AFFX-BioB-M_at
80.3689
P
0.00499819
AFFX-BioB-3_at
61.4319
P
0.0284573
AFFX-BioC-5_at
199.278
P
0.000195116
AFFX-BioC-3_at
117.045
P
0.000509415
AFFX-BioDn-5_at
82.4742
P
0.00255552
AFFX-BioDn-3_at
1050.71
P
0.000146581
AFFX-CreX-5_at
1199.42
P
4.42873e-05
AFFX-CreX-3_at
2616.51
P
4.42873e-05
AFFX-DapX-5_at
2.54089
A
0.686277
AFFX-DapX-M_at
8.12385
A
0.699394
AFFX-DapX-3_at
4.62763
A
0.814869
AFFX-LysX-5_at
4.22729
A
0.52976
AFFX-LysX-M_at
12.2817
A
0.52976
AFFX-LysX-3_at
14.9446
A
0.195266
AFFX-PheX-5_at
12.5032
A
0.39692
AFFX-PheX-M_at
2.34129
A
0.963431
AFFX-PheX-3_at
10.6386
A
0.470241
AFFX-ThrX-5_at
3.23789
A
0.960339
AFFX-ThrX-M_at
2.96212
A
0.883887
Total number of rows:
22283
Table truncated, full table size
666 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249405.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
GSM249405.CHP.gz
6.0 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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