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GEO accession:
Sample GSM249406
Query DataSets for GSM249406
Status
Public on Dec 14, 2007
Title
Foam cells from subject with atherosclerosis, pair L.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
89.8394
M
0.0429619
AFFX-BioB-M_at
85.2548
P
0.00687065
AFFX-BioB-3_at
67.1164
M
0.0464816
AFFX-BioC-5_at
237.387
P
0.000146581
AFFX-BioC-3_at
131.469
P
0.000195116
AFFX-BioDn-5_at
120.685
P
0.0020226
AFFX-BioDn-3_at
1267
P
0.000126798
AFFX-CreX-5_at
1561.81
P
4.42873e-05
AFFX-CreX-3_at
3075.81
P
4.42873e-05
AFFX-DapX-5_at
10.0764
A
0.227636
AFFX-DapX-M_at
7.58117
A
0.814869
AFFX-DapX-3_at
7.41262
A
0.783476
AFFX-LysX-5_at
3.94736
A
0.749204
AFFX-LysX-M_at
9.36988
A
0.58862
AFFX-LysX-3_at
10.8762
A
0.559354
AFFX-PheX-5_at
6.41042
A
0.772364
AFFX-PheX-M_at
3.10272
A
0.969024
AFFX-PheX-3_at
26.5618
A
0.52976
AFFX-ThrX-5_at
3.38209
A
0.987453
AFFX-ThrX-M_at
10.1371
A
0.686277
Total number of rows:
22283
Table truncated, full table size
663 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249406.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249406.CHP.gz
6.0 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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