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GEO accession:
Sample GSM249407
Query DataSets for GSM249407
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject without atherosclerosis, pair L.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject without atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
124.888
P
0.00844047
AFFX-BioB-M_at
189.312
P
0.000195116
AFFX-BioB-3_at
99.1913
P
0.000509415
AFFX-BioC-5_at
374.293
P
8.14279e-05
AFFX-BioC-3_at
190.939
P
7.00668e-05
AFFX-BioDn-5_at
216.915
P
0.000146581
AFFX-BioDn-3_at
2087.4
P
0.000126798
AFFX-CreX-5_at
2724.99
P
4.42873e-05
AFFX-CreX-3_at
4561.62
P
4.42873e-05
AFFX-DapX-5_at
9.92959
A
0.275146
AFFX-DapX-M_at
20.9637
A
0.205732
AFFX-DapX-3_at
5.65906
A
0.712257
AFFX-LysX-5_at
10.0148
A
0.354453
AFFX-LysX-M_at
6.97778
A
0.58862
AFFX-LysX-3_at
1.22054
A
0.760937
AFFX-PheX-5_at
2.62154
A
0.783476
AFFX-PheX-M_at
2.06152
A
0.783476
AFFX-PheX-3_at
28.5764
A
0.262827
AFFX-ThrX-5_at
5.3369
A
0.60308
AFFX-ThrX-M_at
13.5387
A
0.275146
Total number of rows:
22283
Table truncated, full table size
664 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249407.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249407.CHP.gz
5.8 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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