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GEO accession:
Sample GSM249416
Query DataSets for GSM249416
Status
Public on Dec 14, 2007
Title
Foam cells from subject without atherosclerosis, pair N.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject without atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
53.6423
A
0.123572
AFFX-BioB-M_at
120.833
P
0.00179591
AFFX-BioB-3_at
47.8461
P
0.0166701
AFFX-BioC-5_at
190.951
P
0.000340305
AFFX-BioC-3_at
107.54
P
0.000509415
AFFX-BioDn-5_at
134.957
P
0.00499819
AFFX-BioDn-3_at
1034.37
P
0.000856509
AFFX-CreX-5_at
1272.23
P
4.42873e-05
AFFX-CreX-3_at
2084.15
P
5.16732e-05
AFFX-DapX-5_at
10.4266
A
0.227636
AFFX-DapX-M_at
14.3781
A
0.382599
AFFX-DapX-3_at
1.28341
A
0.99238
AFFX-LysX-5_at
2.32553
A
0.749204
AFFX-LysX-M_at
17.4992
A
0.275146
AFFX-LysX-3_at
1.73112
A
0.672921
AFFX-PheX-5_at
2.23938
A
0.868639
AFFX-PheX-M_at
3.54148
A
0.804734
AFFX-PheX-3_at
14.3035
A
0.52976
AFFX-ThrX-5_at
2.29881
A
0.852061
AFFX-ThrX-M_at
5.18488
A
0.645547
Total number of rows:
22283
Table truncated, full table size
665 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249416.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
GSM249416.CHP.gz
6.0 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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