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GEO accession:
Sample GSM249421
Query DataSets for GSM249421
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair P.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
67.8102
A
0.0726999
AFFX-BioB-M_at
115.948
P
0.000296708
AFFX-BioB-3_at
93.9061
P
0.0113844
AFFX-BioC-5_at
288.785
P
0.000296708
AFFX-BioC-3_at
164.329
P
0.000169227
AFFX-BioDn-5_at
178.254
P
0.00359458
AFFX-BioDn-3_at
1321
P
8.14279e-05
AFFX-CreX-5_at
1610.75
P
4.42873e-05
AFFX-CreX-3_at
3260.06
P
4.42873e-05
AFFX-DapX-5_at
30.3247
A
0.083592
AFFX-DapX-M_at
13.315
A
0.645547
AFFX-DapX-3_at
7.84845
A
0.772364
AFFX-LysX-5_at
3.16315
A
0.949771
AFFX-LysX-M_at
7.82433
A
0.724854
AFFX-LysX-3_at
18.4891
A
0.313723
AFFX-PheX-5_at
6.92252
A
0.712257
AFFX-PheX-M_at
2.96375
A
0.969024
AFFX-PheX-3_at
10.4467
A
0.455413
AFFX-ThrX-5_at
6.4919
A
0.749204
AFFX-ThrX-M_at
7.78693
A
0.760937
Total number of rows:
22283
Table truncated, full table size
663 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249421.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
GSM249421.CHP.gz
6.1 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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