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Sample GSM252373 Query DataSets for GSM252373
Status Public on Oct 01, 2008
Title BY4742 wildtype
Sample type RNA
 
Source name BY4742
Organism Saccharomyces cerevisiae
Characteristics wildtype strain BY4742
Biomaterial provider Feilong Meng, from Telomere, telomerase and cellular aging group in SIBS
Treatment protocol innoculate in 5ml YPD liquid medium
harvest at mid-log phase
Growth protocol innoculate in 5ml YPD liquid medium
harvest at mid-log phase
Extracted molecule total RNA
Extraction protocol the RNeasy Mini Kit (Qiagen) and on-column DNase Digestion Kit (Qiagen)
Label biotin
Label protocol IVT Labeling Kit Affymetrix
 
Hybridization protocol Hybridization Control Kit Affymetrix
Scan protocol Gene array Scanner3000 Affymetrix
Description performed following Affymetrix standard protocols
Data processing GCOS1.2 Affymetrix
 
Submission date Dec 20, 2007
Last update date Dec 21, 2007
Contact name feilong meng
E-mail(s) flmeng@sibs.ac.cn
Phone 86-21-54921092
Fax 86-21-54921076
Organization name Shanghai institutes for biology sciences
Department SIBCB
Lab telomere and telomerase
Street address 320 yuyang road
City shanghai
ZIP/Postal code 200031
Country China
 
Platform ID GPL2529
Series (1)
GSE9985 sua5D expression profiles

Data table header descriptions
ID_REF
VALUE signal detection
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 126.757 P 7.00668e-05
AFFX-BioB-M_at 178.962 P 4.42873e-05
AFFX-BioB-3_at 120.28 P 4.42873e-05
AFFX-BioC-5_at 292.116 P 4.42873e-05
AFFX-BioC-3_at 499.763 P 4.42873e-05
AFFX-BioDn-5_at 976.426 P 4.42873e-05
AFFX-BioDn-3_at 2033.77 P 4.42873e-05
AFFX-CreX-5_at 4259.82 P 4.42873e-05
AFFX-CreX-3_at 4439.44 P 4.42873e-05
AFFX-DapX-5_at 637.299 P 4.42873e-05
AFFX-DapX-M_at 924.549 P 4.42873e-05
AFFX-DapX-3_at 1001.92 P 4.42873e-05
AFFX-LysX-5_at 51.9833 P 4.42873e-05
AFFX-LysX-M_at 67.0156 P 0.000169227
AFFX-LysX-3_at 204.6 P 4.42873e-05
AFFX-PheX-5_at 88.2698 P 6.02111e-05
AFFX-PheX-M_at 119.714 P 4.42873e-05
AFFX-PheX-3_at 158.22 P 4.42873e-05
AFFX-ThrX-5_at 148.249 P 7.00668e-05
AFFX-ThrX-M_at 238.39 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM252373.CEL.gz 965.1 Kb (ftp)(http) CEL
GSM252373.CHP.gz 57.3 Kb (ftp)(http) CHP
Processed data included within Sample table

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