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Sample GSM264710 Query DataSets for GSM264710
Status Public on Feb 13, 2008
Title HCC12
Sample type RNA
 
Channel 1
Source name HCC12
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells from type C LC with HCC No.12
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC12
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10459 Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients

Data table header descriptions
ID_REF
VALUE HCC12 fold change
Ch1_Int HCC12 intensity
Ch1_BG HCC12 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 -0.090000004 790 259.25 1083 635.75
AGhsA010103 0.109999999 846 285.25 1076.5 664.75
AGhsA010105 0.100000001 987.5 278.75 1168 646
AGhsA010106 0.280000001 1463 260 1491 706.25
AGhsA010108 -0.050000001 8115 292.5 7122 707.25
AGhsA010109 -0.059999999 645 287.75 1010.5 716.5
AGhsA010110 0.079999998 532.5 309.5 912 745.25
AGhsA010111 -1.019999981 1495 290 2624 696.25
AGhsA010112 -1.50999999 397 307.25 913.5 712
AGhsA010113 -0.370000005 701 272.75 1118 680
AGhsA010114 -1.139999986 345 259.25 784.5 635.75
AGhsA010115 -0.899999976 9739.5 285.25 14566 664.75
AGhsA010116 -0.209999993 683.5 280 1020.5 651.25
AGhsA010119 0.800000012 37185.5 279.5 17455 723.5
AGhsA010120 -0.479999989 3545.5 292.5 4299.5 707.25
AGhsA010121 0.209999993 954 287.75 1172 716.5
AGhsA010122 -0.649999976 9203.5 309.5 11764.5 745.25
AGhsA010123 -0.550000012 821.5 290 1311 696.25
AGhsA010201 -0.310000002 838 277.75 1198.5 651.25
AGhsA010203 0.699999988 681.5 278.5 840 643.75

Total number of rows: 13765

Table truncated, full table size 623 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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