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Sample GSM264719 Query DataSets for GSM264719
Status Public on Feb 13, 2008
Title HCC21
Sample type RNA
 
Channel 1
Source name HCC21
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells from type C LC with HCC No.21
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC21
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10459 Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients

Data table header descriptions
ID_REF
VALUE HCC21 fold change
Ch1_Int HCC21 intensity
Ch1_BG HCC21 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 0 1553.5 645.25 1959 907.75
AGhsA010103 0 2492 706.75 2963 903
AGhsA010105 -0.119999997 2294 686 2957 937
AGhsA010106 0.129999995 2742 832.25 2984 963.25
AGhsA010107 0.560000002 1157.5 827.25 1263 1004.5
AGhsA010108 0.939999998 49796 760.25 30538.5 920.75
AGhsA010109 -0.819999993 1402 607.5 2495 879.75
AGhsA010110 -0.300000012 1222 551.75 1684 730.75
AGhsA010111 -1.230000019 4433.5 616 11155 844.5
AGhsA010112 -0.939999998 727.5 559.5 1167.5 795.5
AGhsA010113 -0.140000001 2458 659.5 3140 852.75
AGhsA010114 0.270000011 991 645.25 1240 907.75
AGhsA010115 -0.389999986 43335 706.75 65535 903
AGhsA010116 -0.479999989 2120 716.75 3157 900.5
AGhsA010118 -0.310000002 1187 832.25 1473 963.25
AGhsA010119 0.310000002 65535 827.25 61293.5 1004.5
AGhsA010120 -0.270000011 25093 760.25 34791.5 920.75
AGhsA010121 0.280000001 1097 607.5 1346 879.75
AGhsA010122 -1.129999995 26164 551.75 65535 730.75
AGhsA010123 -1.190000057 1288 616 2618 844.5

Total number of rows: 19652

Table truncated, full table size 899 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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