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Sample GSM264720 Query DataSets for GSM264720
Status Public on Feb 13, 2008
Title HCC22
Sample type RNA
 
Channel 1
Source name HCC22
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells from type C LC with HCC No.22
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC22
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10459 Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients

Data table header descriptions
ID_REF
VALUE HCC22 fold change
Ch1_Int HCC22 intensity
Ch1_BG HCC22 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 -0.150000006 1299 1014.75 2161 1194.75
AGhsA010103 0.050000001 1653 1013.5 3134 1229.25
AGhsA010105 -0.140000001 1476 982.75 2883 1215.5
AGhsA010106 0.379999995 1683 991.5 2827 1189
AGhsA010108 1.360000014 43563.5 998.75 52090.5 1220.5
AGhsA010110 -0.230000004 1164 1004 1795 1219.25
AGhsA010111 -1.100000024 2486 1042.5 10941 1430.25
AGhsA010112 -0.469999999 1175 1028.75 2027.5 1405.5
AGhsA010113 0.370000005 1542 996.25 2556 1255
AGhsA010114 0.02 1092.5 1014.75 1430 1194.75
AGhsA010115 -0.159999996 19727.5 1013.5 65535 1229.25
AGhsA010116 -0.389999986 1606.5 1007 3587 1168.25
AGhsA010118 -0.07 1066 991.5 1429.5 1189
AGhsA010119 0.209999993 25189.5 1001.5 65535 1212.75
AGhsA010120 -0.25 11487.5 998.75 39634 1220.5
AGhsA010122 -0.449999988 16296.5 1004 65535 1219.25
AGhsA010123 -0.050000001 1787 1042.5 3797 1430.25
AGhsA010201 -0.860000014 1482.5 1058.25 3632 1258.25
AGhsA010203 1.389999986 1192.5 1046.5 1494 1323
AGhsA010204 -0.180000007 9988.5 1058.25 32344 1289.5

Total number of rows: 14560

Table truncated, full table size 704 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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