NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM264727 Query DataSets for GSM264727
Status Public on Feb 13, 2008
Title HCC29
Sample type RNA
 
Channel 1
Source name HCC29
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells from type C LC with HCC No.29
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC29
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10459 Expression profile of peripheral blood mononuclear cells obtained from type C cirrhotic patients

Data table header descriptions
ID_REF
VALUE HCC29 fold change
Ch1_Int HCC29 intensity
Ch1_BG HCC29 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010101 0.860000014 545 405.25 842.5 733.75
AGhsA010102 -0.209999993 793 418 1345 735.5
AGhsA010103 -0.25 1452.5 386.5 2596.5 810.5
AGhsA010105 -0.360000014 1071 474.75 1992.5 915.25
AGhsA010106 0.209999993 2747 487.75 3584 826.75
AGhsA010108 0.5 65535 426.75 65535 891
AGhsA010109 -0.159999996 1223 466.75 2123.5 932
AGhsA010111 0.25999999 1885.5 476.5 2643.5 988.5
AGhsA010113 0.439999998 1399.5 405.25 1766.5 733.75
AGhsA010114 -0.209999993 635 418 1090 735.5
AGhsA010115 -0.07 36588 386.5 54181.5 810.5
AGhsA010116 -0.280000001 1097 434.25 1962.5 832.25
AGhsA010118 -0.230000004 771 487.75 1293.5 826.75
AGhsA010119 1.029999971 65535 483.5 45852.5 983.75
AGhsA010120 0.079999998 23245 426.75 31193.5 891
AGhsA010121 0.340000004 1131 466.75 1671 932
AGhsA010122 -0.850000024 20173.5 426.5 50986.5 919.25
AGhsA010123 -1.120000005 2904.5 476.5 8397.5 988.5
AGhsA010201 -0.159999996 1667 382 2724 708.5
AGhsA010203 0.479999989 703 413.5 1061.5 769.5

Total number of rows: 15163

Table truncated, full table size 694 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap