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Sample GSM264731 Query DataSets for GSM264731
Status Public on Feb 13, 2008
Title HCC-IL HCC-ope3
Sample type RNA
 
Channel 1
Source name HCC-IL HCC-ope3
Organism Homo sapiens
Characteristics Hepatocellular Carcinoma-infiltrating Lymphocytes of HCC-ope No.3
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC-IL HCC-ope3
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description N/A
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10461 Non-cancerous liver infiltrating lymphocytes of hepatitis C and tumor-infiltrating lymphocytes

Data table header descriptions
ID_REF
VALUE HCC-IL HCC-ope3 fold change
Ch1_Int HCC-IL HCC-ope3 intensity
Ch1_BG HCC-IL HCC-ope3 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 0.189033821 1805 945.25 2200 1246.75
AGhsA010103 0.150559679 2679 948.75 3213.5 1238
AGhsA010105 -0.494109064 2243.5 940 3597 1270.5
AGhsA010106 -0.810966194 2832 989 5336 1267.25
AGhsA010107 0.613531649 1429.5 981 1659 1289
AGhsA010108 -2.395928621 10479 951.75 65535 1253
AGhsA010109 -0.454031616 1684 940.5 2628.5 1347.25
AGhsA010110 -0.089267336 1374.5 926 1877 1274
AGhsA010111 -3.321928024 1957 921.25 14098 1247.25
AGhsA010112 -0.340075433 1226.5 898.5 1850.5 1326
AGhsA010113 0.464668274 2198 1011.5 2461 1371.25
AGhsA010114 -0.286304176 1172 945.25 1597 1246.75
AGhsA010115 0.13750352 54711 948.75 63163.5 1238
AGhsA010116 -0.415037513 2507 969 3876.5 1282.5
AGhsA010118 -1.286304235 1135 989 1714.5 1267.25
AGhsA010119 -1.556393385 18101.5 981 65535 1289
AGhsA010120 -2.395928621 9442.5 951.75 56305 1253
AGhsA010121 -0.599462092 1476.5 940.5 2370.5 1347.25
AGhsA010122 -0.395928681 39375 926 65535 1274
AGhsA010123 -0.761213124 1420 921.25 2313.5 1247.25

Total number of rows: 18146

Table truncated, full table size 865 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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