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Sample GSM264732 Query DataSets for GSM264732
Status Public on Feb 13, 2008
Title HCC-IL HCC-ope4
Sample type RNA
 
Channel 1
Source name HCC-IL HCC-ope4
Organism Homo sapiens
Characteristics Hepatocellular Carcinoma-infiltrating Lymphocytes of HCC-ope No.4
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC-IL HCC-ope4
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description N/A
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10461 Non-cancerous liver infiltrating lymphocytes of hepatitis C and tumor-infiltrating lymphocytes

Data table header descriptions
ID_REF
VALUE HCC-IL HCC-ope4 fold change
Ch1_Int HCC-IL HCC-ope4 intensity
Ch1_BG HCC-IL HCC-ope4 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 -1.15200305 1883 1342 2575 1651.5
AGhsA010103 -0.643856168 2403.5 1418.5 3014.5 1825.75
AGhsA010105 -0.915935755 2136 1584.5 2907.5 2107.25
AGhsA010106 1.627606869 7951 1469.25 3582 1957
AGhsA010108 -5.058893681 3271 1534.25 50782 1825.25
AGhsA010109 -1.395928621 1798 1552.5 2434.5 1936.75
AGhsA010111 -6.643856049 2085.5 1684.5 24698 2063
AGhsA010112 -1.217591405 1995 1595.5 2701 1984.5
AGhsA010113 -0.810966194 2009 1370.25 2600.5 1728.25
AGhsA010115 -1.514573216 22438 1418.5 48989 1825.75
AGhsA010116 -0.689659894 1930 1482 2432.5 1873
AGhsA010119 -4.058893681 6643 1530 65535 1864.75
AGhsA010120 -3.643856287 3702 1534.25 24156 1825.25
AGhsA010121 -2.473931074 1759 1552.5 2837.5 1936.75
AGhsA010122 -1.514573216 29504.5 1484.5 64110.5 1915.25
AGhsA010201 -1.434402823 2496 1513.5 3769 1696.75
AGhsA010203 -0.810966194 1875.5 1320.75 2444.5 1695.5
AGhsA010204 0.344828486 17227 1469.25 11506.5 1918.5
AGhsA010205 -0.514573157 58935.5 1427 65535 1790.25
AGhsA010206 -0.915935755 2747.5 1471.75 3787 1909.5

Total number of rows: 13355

Table truncated, full table size 646 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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