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Sample GSM264735 Query DataSets for GSM264735
Status Public on Feb 13, 2008
Title HCC-IL HCC-ope7
Sample type RNA
 
Channel 1
Source name HCC-IL HCC-ope7
Organism Homo sapiens
Characteristics Hepatocellular Carcinoma-infiltrating Lymphocytes of HCC-ope No.7
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC-IL HCC-ope7
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description N/A
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10461 Non-cancerous liver infiltrating lymphocytes of hepatitis C and tumor-infiltrating lymphocytes

Data table header descriptions
ID_REF
VALUE HCC-IL HCC-ope6 fold change
Ch1_Int HCC-IL HCC-ope6 intensity
Ch1_BG HCC-IL HCC-ope6 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 -0.434402823 2108 1383.5 2683 1747.5
AGhsA010103 0.604071319 5289.5 1382.5 4189.5 1715.25
AGhsA010104 0.378511637 1587 1379.75 1878.5 1725.5
AGhsA010105 -0.168122754 2841 1344.5 3324 1705
AGhsA010106 0.042644337 2767.5 1393.75 3017.5 1739.5
AGhsA010107 -1.434402823 1503 1385.75 2047 1738.75
AGhsA010108 -2.251538754 13228 1433.75 55222.5 1819.5
AGhsA010109 0.985500455 3316 1410.5 2706 1781
AGhsA010110 -0.029146345 2197.5 1396.25 2535.5 1747.25
AGhsA010111 -3.321928024 1892.5 1433.25 6384 1892.75
AGhsA010113 0.321928084 4218 1272.25 3934 1675
AGhsA010115 -0.043943349 65535 1382.5 65535 1715.25
AGhsA010116 0.584962487 5822 1379.75 4581.5 1725.5
AGhsA010118 -0.621488392 1634 1393.75 2096 1739.5
AGhsA010119 -1.736965537 21285 1385.75 65535 1738.75
AGhsA010120 -1.599462032 21896 1433.75 61061.5 1819.5
AGhsA010121 -0.535331726 2183.5 1410.5 2865.5 1781
AGhsA010122 0.111031309 65535 1396.25 58628.5 1747.25
AGhsA010123 -0.304006189 1775.5 1433.25 2300 1892.75
AGhsA010201 1.117695093 4240 1419.75 3126 1877.75

Total number of rows: 17461

Table truncated, full table size 852 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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