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Sample GSM264739 Query DataSets for GSM264739
Status Public on Feb 13, 2008
Title HCC-IL HCC-ope12
Sample type RNA
 
Channel 1
Source name HCC-IL HCC-ope12
Organism Homo sapiens
Characteristics Hepatocellular Carcinoma-infiltrating Lymphocytes of HCC-ope No.12
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC-IL HCC-ope12
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description N/A
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10461 Non-cancerous liver infiltrating lymphocytes of hepatitis C and tumor-infiltrating lymphocytes

Data table header descriptions
ID_REF
VALUE HCC-IL HCC-ope12 fold change
Ch1_Int HCC-IL HCC-ope12 intensity
Ch1_BG HCC-IL HCC-ope12 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 -0.268816769 2216.5 1408 2053 1157
AGhsA010103 0.505890906 3005 1434.25 2273 1252.25
AGhsA010105 -0.104697376 3125 1677.5 2780 1346.75
AGhsA010106 -0.556393325 2916 1428 3292 1278.25
AGhsA010107 0.097610794 1739.5 1411.5 1574.5 1291
AGhsA010108 -1.836501241 10946.5 1413 32670.5 1310.25
AGhsA010109 -0.029146345 2847 1366.25 2691.5 1291.5
AGhsA010110 0.310340106 2210 1397 1918 1310.5
AGhsA010111 -3.473931074 3484.5 1434 21801.5 1395.25
AGhsA010113 0.238786861 3751 1428.5 3066 1254
AGhsA010114 -0.689659894 1516.5 1408 1317.5 1157
AGhsA010115 0.443606645 31098.5 1434.25 21428.5 1252.25
AGhsA010116 0.704871953 2349.5 1400.75 1790.5 1251.5
AGhsA010118 -0.340075433 1552 1428 1422.5 1278.25
AGhsA010119 -2.83650136 9953 1411.5 58171 1291
AGhsA010120 -2.184424639 7366.5 1413 26418 1310.25
AGhsA010121 -0.168122754 2572.5 1366.25 2542 1291.5
AGhsA010122 -0.120294236 65535 1397 65535 1310.5
AGhsA010123 -1.286304235 1863.5 1434 2366.5 1395.25
AGhsA010201 1.316145778 5503 1471 2736 1238.75

Total number of rows: 14476

Table truncated, full table size 702 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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