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Sample GSM264740 Query DataSets for GSM264740
Status Public on Feb 13, 2008
Title HCC-IL HCC-ope13
Sample type RNA
 
Channel 1
Source name HCC-IL HCC-ope13
Organism Homo sapiens
Characteristics Hepatocellular Carcinoma-infiltrating Lymphocytes of HCC-ope No.13
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label HCC-IL HCC-ope13
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
Channel 2
Source name reference
Organism Homo sapiens
Characteristics peripheral blood mononuclear cells of healthy volunteer
Extracted molecule polyA RNA
Extraction protocol Micro RNA isolation kit (Stratagene)
Label reference
Label protocol Amino Allyl MessageAmp aRNA kit (Ambion)
 
 
Hybridization protocol HitachiSoft AceGene
Scan protocol ScanArray G, DNASIS array v2.6
Description N/A
Data processing Global Normalization
 
Submission date Feb 09, 2008
Last update date Feb 12, 2008
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platform ID GPL1291
Series (1)
GSE10461 Non-cancerous liver infiltrating lymphocytes of hepatitis C and tumor-infiltrating lymphocytes

Data table header descriptions
ID_REF
VALUE HCC-IL HCC-ope13 fold change
Ch1_Int HCC-IL HCC-ope13 intensity
Ch1_BG HCC-IL HCC-ope13 background
Ch2_Int reference intensity
Ch2_BG reference background

Data table
ID_REF VALUE Ch1_Int Ch1_BG Ch2_Int Ch2_BG
AGhsA010102 -0.377069652 3154 1429.25 4122 1450
AGhsA010103 0.214124799 4235.5 1503.5 4382 1574.5
AGhsA010105 -0.454031616 2687.5 1398.5 3556 1460
AGhsA010106 -0.862496495 2957.5 1557.75 4551 1538.25
AGhsA010108 -1.689659834 6788 1495.75 22099 1671.25
AGhsA010109 0.111031309 2756.5 1549.5 2933.5 1600.5
AGhsA010110 0.400537938 2291.5 1433.5 2269 1496.75
AGhsA010111 -2.643856287 2946 1399 12713 1564.75
AGhsA010112 -0.251538754 2082.5 1478.25 2428 1567.75
AGhsA010113 -0.340075433 4457 1611.25 5875.5 1596.5
AGhsA010114 -0.535331726 1624 1429.25 1785 1450
AGhsA010115 0.464668274 62448 1503.5 54070 1574.5
AGhsA010116 0.163498729 2762.5 1498.75 2863 1524
AGhsA010119 -2.643856287 10034 1586.5 65535 1573.75
AGhsA010120 -1.888968706 6200.5 1495.75 22216.5 1671.25
AGhsA010121 -0.736965597 2179 1549.5 2855.5 1600.5
AGhsA010122 0.250961572 65535 1433.5 65535 1496.75
AGhsA010123 -1 2945.5 1399 5223 1564.75
AGhsA010201 0.565597177 5156.5 1536.25 4498 1582.25
AGhsA010202 1.713695765 1922 1497 1797 1643

Total number of rows: 16705

Table truncated, full table size 812 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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