NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2850120 Query DataSets for GSM2850120
Status Public on Nov 15, 2019
Title patient 4 C-Mo
Sample type RNA
 
Source name classical monocytes
Organism Homo sapiens
Characteristics monocyte subset: classical
disease state: renal cell carcinoma (RCC)
Extracted molecule total RNA
Extraction protocol RNA was extracted using Trizol reagent.
Label biotin
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Data processing The data were quantile normalized in R
 
Submission date Nov 10, 2017
Last update date Nov 15, 2019
Contact name Jason Muhitch
E-mail(s) Jason.Muhitch@roswellpark.org
Organization name Roswell Park Cancer Institute
Department Urology
Street address Elm & Carlton Sts.
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platform ID GPL10904
Series (1)
GSE106771 Analysis of classical monocytes from healthy donors, pretreatment RCC patients, and RCC long term survivors.

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
7A5 -2.6 0.62208
A1BG 5.8 0.19837
A1CF 0.6 0.39004
A26C3 -4.8 0.8089
A2BP1 -2.8 0.72219
A2LD1 88 0
A2M -6.5 0.83766
A2ML1 -9.8 0.95455
A3GALT2 -3.8 0.81212
A4GALT -7.2 0.87532
A4GNT 10.4 0.08701
AAA1 1.4 0.17736
AAAS 121.3 0
AACS 41.3 0
AACSL 22.7 0.00909
AADAC -1.6 0.56234
AADACL1 303.3 0
AADACL2 -9 0.92857
AADACL3 -7.1 0.86623
AADACL4 0.4 0.42208

Total number of rows: 34688

Table truncated, full table size 655 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap