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Series GSE106771 Query DataSets for GSE106771
Status Public on Nov 15, 2019
Title Analysis of classical monocytes from healthy donors, pretreatment RCC patients, and RCC long term survivors.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Peripheral blood monocytes are the starting material utilized in conventional dendritic cell (DC) vaccination for the treatment of a broad range of malignancies. While the use of cytokines and growth factors to polarize monocyte-derived DC to distinct phenotypes is well-established, little is known about the contributions of distinct human monocyte subsets to monocyte-derived DC function and patient responses to vaccination. To investigate the status of monocyte subsets in cancer patients and following culture into DC, we isolated classical (C-Mo), intermediate (I-Mo), and non-classical (NC-Mo) from the peripheral blood of renal cell carcinoma (RCC) patients prior to DC vaccination (NCT00085436) and from anonymous healthy donors. Patients treated with DC vaccination who were long term survivors (>100 months survival) had a unique monocyte signature with a two-fold higher percentage of NC-Mo in pretreatment peripheral blood compared to other RCC patients. RCC patient monocytes from each subset were transcriptionally distinct from healthy donor monocytes. Further transcriptional analysis determined that each monocyte subset was characterized by a discrete gene expression profile before and after DC maturation. Phenotypic analysis showed that DC derived from NC-Mo expressed higher levels of CD80, CD83, CD86, HLA-DR, and CD40 compared to DC originating from C-Mo and secreted increased amounts of IL-12p70 following CD40L stimulation. Collectively, these findings establish that DC derived from NC-Mo are potent antigen presenting cells and provide the foundation for future vaccination strategies that enrich NC-Mo prior to DC maturation.
 
Overall design Classical monocytes from healthy donor controls, pretreatment RCC patients, RCC long term survivors, and a recent blood draw from the long term survivors up to 8 years post-treatment initiation.
 
Contributor(s) Muhitch J
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Submission date Nov 10, 2017
Last update date Nov 15, 2019
Contact name Jason Muhitch
E-mail(s) Jason.Muhitch@roswellpark.org
Organization name Roswell Park Cancer Institute
Department Urology
Street address Elm & Carlton Sts.
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platforms (1)
GPL10904 Illumina HumanHT-12 V4.0 expression beadchip (gene symbol)
Samples (12)
GSM2850119 patient 2 C-Mo
GSM2850120 patient 4 C-Mo
GSM2850121 patient 5 C-Mo
Relations
BioProject PRJNA418161

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106771_non-normalized.txt.gz 1.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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