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Sample GSM2850121 Query DataSets for GSM2850121
Status Public on Nov 15, 2019
Title patient 5 C-Mo
Sample type RNA
 
Source name classical monocytes
Organism Homo sapiens
Characteristics monocyte subset: classical
disease state: renal cell carcinoma (RCC)
Extracted molecule total RNA
Extraction protocol RNA was extracted using Trizol reagent.
Label biotin
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Data processing The data were quantile normalized in R
 
Submission date Nov 10, 2017
Last update date Nov 15, 2019
Contact name Jason Muhitch
E-mail(s) Jason.Muhitch@roswellpark.org
Organization name Roswell Park Cancer Institute
Department Urology
Street address Elm & Carlton Sts.
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platform ID GPL10904
Series (1)
GSE106771 Analysis of classical monocytes from healthy donors, pretreatment RCC patients, and RCC long term survivors.

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
7A5 -1.7 0.53896
A1BG 5.1 0.15884
A1CF 4 0.10401
A26C3 -1.4 0.74124
A2BP1 -2.1 0.74724
A2LD1 66.7 0
A2M -7.5 0.86883
A2ML1 -7.8 0.87662
A3GALT2 0.2 0.40267
A4GALT 3 0.32208
A4GNT 3.1 0.31688
AAA1 -1 0.58287
AAAS 128.4 0
AACS 47.8 0.0013
AACSL 21.8 0.01169
AADAC -0.7 0.48961
AADACL1 286.5 0
AADACL2 -6.7 0.84156
AADACL3 0.4 0.43636
AADACL4 2 0.36494

Total number of rows: 34688

Table truncated, full table size 662 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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