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Sample GSM2850122 Query DataSets for GSM2850122
Status Public on Nov 15, 2019
Title patient 10 C-Mo
Sample type RNA
 
Source name classical monocytes
Organism Homo sapiens
Characteristics monocyte subset: classical
disease state: renal cell carcinoma (RCC)
Extracted molecule total RNA
Extraction protocol RNA was extracted using Trizol reagent.
Label biotin
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Data processing The data were quantile normalized in R
 
Submission date Nov 10, 2017
Last update date Nov 15, 2019
Contact name Jason Muhitch
E-mail(s) Jason.Muhitch@roswellpark.org
Organization name Roswell Park Cancer Institute
Department Urology
Street address Elm & Carlton Sts.
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platform ID GPL10904
Series (1)
GSE106771 Analysis of classical monocytes from healthy donors, pretreatment RCC patients, and RCC long term survivors.

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
7A5 4.1 0.24675
A1BG 7.3 0.13091
A1CF 6.1 0.08659
A26C3 -1.7 0.55055
A2BP1 -7.8 0.98485
A2LD1 42.5 0.0013
A2M -7.4 0.83896
A2ML1 -8.7 0.8961
A3GALT2 -3 0.67478
A4GALT -7.7 0.85844
A4GNT 13 0.05584
AAA1 2.3 0.44241
AAAS 107.8 0
AACS 25.6 0.00909
AACSL 41.3 0.0013
AADAC -7.8 0.86494
AADACL1 296.6 0
AADACL2 -5.3 0.75065
AADACL3 0.6 0.40519
AADACL4 4 0.25195

Total number of rows: 34688

Table truncated, full table size 659 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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