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Sample GSM2850127 Query DataSets for GSM2850127
Status Public on Nov 15, 2019
Title patient 17 follow up draw C-Mo
Sample type RNA
 
Source name classical monocytes
Organism Homo sapiens
Characteristics monocyte subset: classical
disease state: renal cell carcinoma (RCC)
Extracted molecule total RNA
Extraction protocol RNA was extracted using Trizol reagent.
Label biotin
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Data processing The data were quantile normalized in R
 
Submission date Nov 10, 2017
Last update date Nov 15, 2019
Contact name Jason Muhitch
E-mail(s) Jason.Muhitch@roswellpark.org
Organization name Roswell Park Cancer Institute
Department Urology
Street address Elm & Carlton Sts.
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platform ID GPL10904
Series (1)
GSE106771 Analysis of classical monocytes from healthy donors, pretreatment RCC patients, and RCC long term survivors.

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
7A5 7.1 0.24156
A1BG 1.1 0.60776
A1CF 8.4 0.11889
A26C3 -2.8 0.81589
A2BP1 -6.6 0.96998
A2LD1 49.5 0.05325
A2M -7.3 0.89351
A2ML1 2.2 0.41948
A3GALT2 11.8 0.07092
A4GALT 0.2 0.5013
A4GNT 24.6 0.09091
AAA1 11.6 0.68397
AAAS 48.4 0.05325
AACS 0.2 0.5013
AACSL 0.7 0.48052
AADAC 1.3 0.46234
AADACL1 297.2 0
AADACL2 12.1 0.16623
AADACL3 1.8 0.43766
AADACL4 2.1 0.42857

Total number of rows: 34688

Table truncated, full table size 677 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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