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Sample GSM291439 Query DataSets for GSM291439
Status Public on Jul 01, 2008
Title Day2 EC1118 #2
Sample type RNA
 
Source name Day2 EC1118
Organism Saccharomyces cerevisiae
Characteristics strain: EC1118
replicate: 2
time: Day 2 of fermentation
Extracted molecule total RNA
Extraction protocol Hot-phenol method
Label Biotin
Label protocol Standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 28, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Intensity of gene expression
ABS_CALL Gene present or absent call
DETECTION P-VALUE p-value for detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 207.706 P 7.00668e-05
AFFX-BioB-M_at 316.655 P 4.42873e-05
AFFX-BioB-3_at 204.878 P 4.42873e-05
AFFX-BioC-5_at 130.215 P 4.42873e-05
AFFX-BioC-3_at 193.001 P 4.42873e-05
AFFX-BioDn-5_at 1248.89 P 4.42873e-05
AFFX-BioDn-3_at 2852.01 P 4.42873e-05
AFFX-CreX-5_at 7016.82 P 4.42873e-05
AFFX-CreX-3_at 7102.9 P 4.42873e-05
AFFX-DapX-5_at 524.996 P 5.16732e-05
AFFX-DapX-M_at 1046.7 P 4.42873e-05
AFFX-DapX-3_at 1531.79 P 4.42873e-05
AFFX-LysX-5_at 58.4808 P 4.42873e-05
AFFX-LysX-M_at 129.392 P 7.00668e-05
AFFX-LysX-3_at 293.897 P 4.42873e-05
AFFX-PheX-5_at 77.8234 P 6.02111e-05
AFFX-PheX-M_at 119.414 P 4.42873e-05
AFFX-PheX-3_at 181.843 P 4.42873e-05
AFFX-ThrX-5_at 74.5556 P 7.00668e-05
AFFX-ThrX-M_at 152.467 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM291439.CEL.gz 993.9 Kb (ftp)(http) CEL
GSM291439.CHP.gz 57.1 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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