NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM291538 Query DataSets for GSM291538
Status Public on Jul 01, 2008
Title Day5 DV10 #1
Sample type RNA
 
Source name Day5 DV10
Organism Saccharomyces cerevisiae
Characteristics strain: DV10
replicate: 1
time: Day 5 of fermentation
Extracted molecule total RNA
Extraction protocol Hot-phenol method
Label Biotin
Label protocol Standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 28, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Intensity of gene expression
ABS_CALL Gene present or absent call
DETECTION P-VALUE p-value for detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 221.096 P 7.00668e-05
AFFX-BioB-M_at 377.215 P 5.16732e-05
AFFX-BioB-3_at 248.733 P 4.42873e-05
AFFX-BioC-5_at 514.683 P 4.42873e-05
AFFX-BioC-3_at 580.82 P 4.42873e-05
AFFX-BioDn-5_at 1738.88 P 4.42873e-05
AFFX-BioDn-3_at 3671.01 P 4.42873e-05
AFFX-CreX-5_at 8047.2 P 4.42873e-05
AFFX-CreX-3_at 8553 P 4.42873e-05
AFFX-DapX-5_at 176.765 P 6.02111e-05
AFFX-DapX-M_at 448.866 P 8.14279e-05
AFFX-DapX-3_at 663.489 P 4.42873e-05
AFFX-LysX-5_at 30.2126 P 0.00140923
AFFX-LysX-M_at 52.8094 P 0.000224668
AFFX-LysX-3_at 116.446 P 7.00668e-05
AFFX-PheX-5_at 27.4976 P 0.000389797
AFFX-PheX-M_at 42.1469 P 0.00227496
AFFX-PheX-3_at 80.9043 P 4.42873e-05
AFFX-ThrX-5_at 21.3433 M 0.0542134
AFFX-ThrX-M_at 58.0504 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM291538.CEL.gz 1015.9 Kb (ftp)(http) CEL
GSM291538.CHP.gz 56.8 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap