GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM3031
Query DataSets for GSM3031
Status
Public on Aug 01, 2003
Title
Houston-Aerobic-3
Sample type
RNA
Source name
Rhodobacter sphaeroides 2.4.1
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
mRNA harvested at OD600 of 0.13+/-0.02 by boiling
lysis/hot phenol method. Cells grown at 30% oxygen,
1% carbon dioxide, 69% nitrogen.
Submission date
Nov 26, 2002
Last update date
May 27, 2005
Contact name
Mark Gomelsky
E-mail(s)
gomelsky@uwyo.edu
Phone
307-766-3522
Organization name
University of Wyoming
Department
Molecular Biology
Lab
Gomelsky
Street address
City
Laramie
State/province
WY
ZIP/Postal code
82071
Country
USA
Platform ID
GPL162
Series (1)
GSE532
4 growth modes - RNA from Laramie & Houston RNA
Data table header descriptions
ID_REF
VALUE
relative signal of expression
ABS_CALL
present if p<0.04, absent if p>0.06, marginal if 0.04<p<0.06
DETECTION P-VALUE
stat. significance of detection
Stat Pairs
pairs of PM-MM presnt on chip
Stat Pairs Used
pairs of PM-MM used in analysis
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1
26.7
A
0.364945
14
14
2
46.5
A
0.254899
14
14
3
4.9
A
0.953518
20
20
4
41.8
A
0.227636
20
20
5
25.8
A
0.275146
20
20
6
2.7
A
0.945787
20
20
7
4.1
A
0.659339
20
20
8
6.4
A
0.382599
20
20
9
10.1
A
0.724854
20
20
10
6.7
A
0.52976
20
20
11
17.2
A
0.165861
20
20
12
2.5
A
0.631562
20
20
13
8
A
0.234423
20
19
14
0.6
A
0.963431
20
20
15
0.5
A
0.824672
20
20
16
0.3
A
0.250796
20
20
17
5.4
A
0.749223
20
20
18
5.1
A
0.783476
20
20
19
3.4
A
0.250796
20
20
20
0.6
A
0.932322
20
20
Total number of rows:
5356
Table truncated, full table size
143 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
