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Sample GSM3045520 Query DataSets for GSM3045520
Status Public on Oct 14, 2018
Title genomic DNA from healthy control C02
Sample type genomic
 
Source name C02
Organism Homo sapiens
Characteristics gender: female
tissue: peripheral blood mononuclear
disease state: healthy control
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description healthy control
SAMPLE 27
Data processing BeadStudio software v3.2
 
Submission date Mar 16, 2018
Last update date Oct 14, 2018
Contact name Xingbo Mo
E-mail(s) moxingbo26@163.com
Organization name Soochow University
Street address Renai Road
City Suzhou
ZIP/Postal code 215123
Country China
 
Platform ID GPL13534
Series (1)
GSE111942 Rheumatoid arthritis associated DNA methylation sites in peripheral blood mononuclear cells

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.802
cg00000108 0.991
cg00000109 0.951
cg00000165 0.232
cg00000236 0.945
cg00000289 0.8
cg00000292 0.943
cg00000321 0.273
cg00000363 0.423
cg00000622 0.034
cg00000658 0.913
cg00000714 0.312
cg00000721 0.977
cg00000734 0.044
cg00000769 0.05
cg00000807 0.795
cg00000884 0.928
cg00000905 0.054
cg00000924 0.712
cg00000948 0.959

Total number of rows: 484770

Table truncated, full table size 8008 Kbytes.




Supplementary file Size Download File type/resource
GSM3045520_3999356108_R04C02_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM3045520_3999356108_R04C02_Red.idat.gz 4.0 Mb (ftp)(http) IDAT
Processed data included within Sample table

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