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Series GSE111942 Query DataSets for GSE111942
Status Public on Oct 14, 2018
Title Rheumatoid arthritis associated DNA methylation sites in peripheral blood mononuclear cells
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of rheumatoid arthritis (RA) patients and healthy controls. The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles in peripheral blood mononuclear cells (PBMCs). Samples included 25 RA patients and 18 healthy controls.
 
Overall design To identify more rheumatoid arthritis (RA) associated DNA methylation sites and comprehensively understand their underlying pathologic mechanism, we compared the Illumina Infinium 450k Human DNA methylation microarray data from PBMCs of 25 RA patients with that of 18 healthy controls.
 
Contributor(s) Zhu H, Wu L, Zhu X, Lei S
Citation(s) 30297333
Submission date Mar 16, 2018
Last update date Mar 22, 2019
Contact name Xingbo Mo
E-mail(s) moxingbo26@163.com
Organization name Soochow University
Street address Renai Road
City Suzhou
ZIP/Postal code 215123
Country China
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (43)
GSM3045494 genomic DNA from RA patient A01
GSM3045495 genomic DNA from RA patient A02
GSM3045496 genomic DNA from RA patient A03
Relations
BioProject PRJNA438653

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111942_RAW.tar 529.1 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table

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