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Sample GSM3045524 Query DataSets for GSM3045524
Status Public on Oct 14, 2018
Title genomic DNA from healthy control C06
Sample type genomic
 
Source name C06
Organism Homo sapiens
Characteristics gender: female
tissue: peripheral blood mononuclear
disease state: healthy control
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description healthy control
SAMPLE 31
Data processing BeadStudio software v3.2
 
Submission date Mar 16, 2018
Last update date Oct 14, 2018
Contact name Xingbo Mo
E-mail(s) moxingbo26@163.com
Organization name Soochow University
Street address Renai Road
City Suzhou
ZIP/Postal code 215123
Country China
 
Platform ID GPL13534
Series (1)
GSE111942 Rheumatoid arthritis associated DNA methylation sites in peripheral blood mononuclear cells

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.759
cg00000108 0.992
cg00000109 0.934
cg00000165 0.219
cg00000236 0.933
cg00000289 0.931
cg00000292 0.951
cg00000321 0.286
cg00000363 0.372
cg00000622 0.018
cg00000658 0.903
cg00000714 0.269
cg00000721 0.986
cg00000734 0.033
cg00000769 0.049
cg00000807 0.866
cg00000884 0.959
cg00000905 0.061
cg00000924 0.686
cg00000948 0.966

Total number of rows: 484770

Table truncated, full table size 8006 Kbytes.




Supplementary file Size Download File type/resource
GSM3045524_3999356108_R06C02_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM3045524_3999356108_R06C02_Red.idat.gz 4.0 Mb (ftp)(http) IDAT
Processed data included within Sample table

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