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Sample GSM3045525 Query DataSets for GSM3045525
Status Public on Oct 14, 2018
Title genomic DNA from healthy control C07
Sample type genomic
 
Source name C07
Organism Homo sapiens
Characteristics gender: female
tissue: peripheral blood mononuclear
disease state: healthy control
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description healthy control
SAMPLE 32
Data processing BeadStudio software v3.2
 
Submission date Mar 16, 2018
Last update date Oct 14, 2018
Contact name Xingbo Mo
E-mail(s) moxingbo26@163.com
Organization name Soochow University
Street address Renai Road
City Suzhou
ZIP/Postal code 215123
Country China
 
Platform ID GPL13534
Series (1)
GSE111942 Rheumatoid arthritis associated DNA methylation sites in peripheral blood mononuclear cells

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.674
cg00000108 0.985
cg00000109 0.985
cg00000165 0.194
cg00000236 0.947
cg00000289 0.76
cg00000292 0.967
cg00000321 0.266
cg00000363 0.44
cg00000622 0.023
cg00000658 0.837
cg00000714 0.273
cg00000721 0.977
cg00000734 0.042
cg00000769 0.039
cg00000807 0.848
cg00000884 0.957
cg00000905 0.055
cg00000924 0.657
cg00000948 0.902

Total number of rows: 484770

Table truncated, full table size 8010 Kbytes.




Supplementary file Size Download File type/resource
GSM3045525_3999356134_R01C01_Grn.idat.gz 4.0 Mb (ftp)(http) IDAT
GSM3045525_3999356134_R01C01_Red.idat.gz 4.0 Mb (ftp)(http) IDAT
Processed data included within Sample table

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