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Sample GSM3045528 Query DataSets for GSM3045528
Status Public on Oct 14, 2018
Title genomic DNA from healthy control C10
Sample type genomic
 
Source name C10
Organism Homo sapiens
Characteristics gender: female
tissue: peripheral blood mononuclear
disease state: healthy control
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description healthy control
SAMPLE 35
Data processing BeadStudio software v3.2
 
Submission date Mar 16, 2018
Last update date Oct 14, 2018
Contact name Xingbo Mo
E-mail(s) moxingbo26@163.com
Organization name Soochow University
Street address Renai Road
City Suzhou
ZIP/Postal code 215123
Country China
 
Platform ID GPL13534
Series (1)
GSE111942 Rheumatoid arthritis associated DNA methylation sites in peripheral blood mononuclear cells

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.615
cg00000108 0.993
cg00000109 0.984
cg00000165 0.171
cg00000236 0.889
cg00000289 0.778
cg00000292 0.931
cg00000321 0.354
cg00000363 0.426
cg00000622 0.012
cg00000658 0.917
cg00000714 0.204
cg00000721 0.979
cg00000734 0.052
cg00000769 0.055
cg00000807 0.839
cg00000884 0.967
cg00000905 0.053
cg00000924 0.648
cg00000948 0.967

Total number of rows: 484770

Table truncated, full table size 8011 Kbytes.




Supplementary file Size Download File type/resource
GSM3045528_3999356134_R02C02_Grn.idat.gz 4.0 Mb (ftp)(http) IDAT
GSM3045528_3999356134_R02C02_Red.idat.gz 4.0 Mb (ftp)(http) IDAT
Processed data included within Sample table

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