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Sample GSM3045530 Query DataSets for GSM3045530
Status Public on Oct 14, 2018
Title genomic DNA from healthy control C12
Sample type genomic
 
Source name C12
Organism Homo sapiens
Characteristics gender: female
tissue: peripheral blood mononuclear
disease state: healthy control
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description healthy control
SAMPLE 37
Data processing BeadStudio software v3.2
 
Submission date Mar 16, 2018
Last update date Oct 14, 2018
Contact name Xingbo Mo
E-mail(s) moxingbo26@163.com
Organization name Soochow University
Street address Renai Road
City Suzhou
ZIP/Postal code 215123
Country China
 
Platform ID GPL13534
Series (1)
GSE111942 Rheumatoid arthritis associated DNA methylation sites in peripheral blood mononuclear cells

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.741
cg00000108 0.995
cg00000109 0.938
cg00000165 0.262
cg00000236 0.908
cg00000289 0.776
cg00000292 0.954
cg00000321 0.334
cg00000363 0.406
cg00000622 0.026
cg00000658 0.917
cg00000714 0.158
cg00000721 0.97
cg00000734 0.033
cg00000769 0.043
cg00000807 0.83
cg00000884 0.956
cg00000905 0.065
cg00000924 0.648
cg00000948 0.95

Total number of rows: 484770

Table truncated, full table size 8010 Kbytes.




Supplementary file Size Download File type/resource
GSM3045530_3999356134_R03C02_Grn.idat.gz 4.0 Mb (ftp)(http) IDAT
GSM3045530_3999356134_R03C02_Red.idat.gz 4.0 Mb (ftp)(http) IDAT
Processed data included within Sample table

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