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Sample GSM3045535 Query DataSets for GSM3045535
Status Public on Oct 14, 2018
Title genomic DNA from healthy control C17
Sample type genomic
 
Source name C17
Organism Homo sapiens
Characteristics gender: female
tissue: peripheral blood mononuclear
disease state: healthy control
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description healthy control
SAMPLE 42
Data processing BeadStudio software v3.2
 
Submission date Mar 16, 2018
Last update date Oct 14, 2018
Contact name Xingbo Mo
E-mail(s) moxingbo26@163.com
Organization name Soochow University
Street address Renai Road
City Suzhou
ZIP/Postal code 215123
Country China
 
Platform ID GPL13534
Series (1)
GSE111942 Rheumatoid arthritis associated DNA methylation sites in peripheral blood mononuclear cells

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.725
cg00000108 0.993
cg00000109 0.952
cg00000165 0.198
cg00000236 0.949
cg00000289 0.812
cg00000292 0.951
cg00000321 0.298
cg00000363 0.394
cg00000622 0.02
cg00000658 0.909
cg00000714 0.229
cg00000721 0.976
cg00000734 0.045
cg00000769 0.056
cg00000807 0.819
cg00000884 0.944
cg00000905 0.054
cg00000924 0.663
cg00000948 0.951

Total number of rows: 484770

Table truncated, full table size 8006 Kbytes.




Supplementary file Size Download File type/resource
GSM3045535_3999356134_R06C01_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM3045535_3999356134_R06C01_Red.idat.gz 4.0 Mb (ftp)(http) IDAT
Processed data included within Sample table

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