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Sample GSM305861 Query DataSets for GSM305861
Status Public on Sep 22, 2009
Title Cortex caudal E14 AP2gamma k.o. animal 13
Sample type RNA
 
Source name Cortex E14 (caudal) from knock-out mice
Organism Mus musculus
Characteristics C57Bl/6J background. Mice were Ap2gamma -/- (k.o.). Exon 5 of Ap2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit (Qiagen) including DNase treatment.
Label biotin
Label protocol MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
 
Hybridization protocol According to the Affymetrix expression protocol
Scan protocol According to the Affymetrix expression protocol
Description 400 ng of total RNA were used for amplification
Data processing Normalized Mas5 data
 
Submission date Jul 16, 2008
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) johannes.beckers@helmholtz-munich.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE12134 The transcription factor AP2γ regulates the number of basal progenitors
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas5 normalized data

Data table
ID_REF VALUE
1415670_at 8.935778997
1415671_at 10.80113887
1415672_at 10.98470474
1415673_at 8.275535137
1415674_a_at 10.20589299
1415675_at 9.314478271
1415676_a_at 11.03082343
1415677_at 8.371291886
1415678_at 10.14864349
1415679_at 10.64546861
1415680_at 8.557909096
1415681_at 9.681215888
1415682_at 7.910635583
1415683_at 9.801335371
1415684_at 7.584423781
1415685_at 9.651538988
1415686_at 10.21645963
1415687_a_at 10.87736526
1415688_at 11.0741856
1415689_s_at 9.596476497

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM305861.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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