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Sample GSM305871 Query DataSets for GSM305871
Status Public on Sep 22, 2009
Title Cortex caudal E14 AP2gamma k.o. animal 02
Sample type RNA
 
Source name Cortex E14 (caudal) from knock-out mice
Organism Mus musculus
Characteristics C57Bl/6J background. Ap2gamma -/- (k.o.). Exon 5 of Ap2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit (Qiagen) including DNase treatment
Label biotin
Label protocol MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
 
Hybridization protocol According to the Affymetrix expression protocol
Scan protocol According to the Affymetrix expression protocol
Description 400 ng of total RNA were used for amplification
Data processing Normalized Mas5 data
 
Submission date Jul 16, 2008
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) johannes.beckers@helmholtz-munich.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE12134 The transcription factor AP2γ regulates the number of basal progenitors
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas5 normalized data

Data table
ID_REF VALUE
1415670_at 8.871170054
1415671_at 10.70346712
1415672_at 11.29062045
1415673_at 8.673047235
1415674_a_at 10.49902722
1415675_at 9.390921484
1415676_a_at 11.05761061
1415677_at 8.471197185
1415678_at 10.13073889
1415679_at 10.71295374
1415680_at 8.227116461
1415681_at 9.902583241
1415682_at 8.126588583
1415683_at 9.974070787
1415684_at 7.640304783
1415685_at 9.450677559
1415686_at 10.11634368
1415687_a_at 10.6947665
1415688_at 11.01481478
1415689_s_at 9.437184449

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM305871.CEL.gz 3.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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