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Sample GSM30669 Query DataSets for GSM30669
Status Public on Oct 15, 2004
Title DMD Subject 1, baseline, HU133A
Sample type RNA
 
Source name DMD muscle biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description Subject with Duchenne Muscular Dystrophy, prior to treatment. Messenger RNA isolated from a gastrocnemius muscle needle biopsy was linearly amplified (two rounds) and biotin-labeled using the protocol of Baugh, et al (Baugh, L. R., Hill, A. A., Brown, E. L., and Hunter, C. P. Quantitative analysis of mRNA amplification by in vitro transcription. Nucleic Acids Res 29(5), E29. 2001). Labeled RNA was hybridized to array using Affymetrix' protocol.
Keywords = muscle
Keywords = Duchenne muscular dystrophy
Keywords = oxandrolone
Keywords = androgen
 
Submission date Sep 15, 2004
Last update date May 27, 2005
Contact name Robert C. Olney
E-mail(s) rolney@nemours.org
Phone 904-390-3674
Fax 904-858-3948
Organization name Nemours Children's Clinic
Department Pediatrics
Lab Cellular and Molecular Laboratory
Street address 807 Children's Way
City Jacksonville
State/province FL
ZIP/Postal code 32207
Country USA
 
Platform ID GPL96
Series (1)
GSE1764 Effect of Oxandrolone on Muscle in Duchenne Muscular Dystrophy

Data table header descriptions
ID_REF
VALUE signal as determined by Affymetrix MAS
ABS_CALL call (A, M, P)(absent, marginal, present) as determined by Affymetrix MAS

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 1110.1 P
AFFX-BioB-M_at 2688.9 P
AFFX-BioB-3_at 1340 P
AFFX-BioC-5_at 2659.5 P
AFFX-BioC-3_at 2347.5 P
AFFX-BioDn-5_at 3420.3 P
AFFX-BioDn-3_at 13862.7 P
AFFX-CreX-5_at 25056.5 P
AFFX-CreX-3_at 35372.1 P
AFFX-DapX-5_at 5.6 A
AFFX-DapX-M_at 62.6 A
AFFX-DapX-3_at 4.5 A
AFFX-LysX-5_at 36.7 A
AFFX-LysX-M_at 8.5 A
AFFX-LysX-3_at 6.2 A
AFFX-PheX-5_at 6 A
AFFX-PheX-M_at 5 A
AFFX-PheX-3_at 45.3 A
AFFX-ThrX-5_at 12.6 A
AFFX-ThrX-M_at 28.2 A

Total number of rows: 22283

Table truncated, full table size 403 Kbytes.




Supplementary data files not provided

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