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Sample GSM3102 Query DataSets for GSM3102
Status Public on Jul 01, 2003
Title Gastrointestinal Stroma Tumor: patient GIST-10, tumor tissue, 1st repetition
Sample type RNA
 
Source name Gastrointestinal Stroma Tumor
Organism Homo sapiens
Extracted molecule total RNA
 
Description patientid=GIST-10
sex=f
age=76
birthyear=1921
stage=primary
type=GIST
tumorsite=stomach
survival_months=14
died=no
tumorsize.cm=4
CD34_expression=yes
SMA_expression=yes
S100_expression=no
mitoses_in_10_hpf=0
mucosal_ulceration=no
metastases_or_recurrence=no
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice)
Keywords = Gastrointestinal Stroma Tumor from stomach
Lot batch = filter=36211250 reuse=2 date=27-Sep-2000
 
Submission date Dec 11, 2002
Last update date Jun 17, 2014
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE112 Distinctive gene expression patterns in gastrointestinal stromal tumors identified with cDNA arrays

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-BKD_RAW

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 938431 511225 427206
2 413383 511225 -97842
3 727647 511225 216422
4 345059 511225 -166166
5 530875 511225 19650
6 11502272 511225 10991047
7 49751348 511225 49240123
8 359229 511225 -151996
9 642448 511225 131223
10 161677 511225 -349548
11 765044 511225 253819
12 1303531 511225 792306
13 38338188 511225 37826963
14 344235 511225 -166990
15 169802 511225 -341423
16 170167 511225 -341058
17 685697 462400 223297
18 339759 462400 -122641
19 612459 462400 150059
20 213065 462400 -249335

Total number of rows: 36864

Table truncated, full table size 988 Kbytes.




Supplementary data files not provided

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