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GEO accession:
Sample GSM312448
Query DataSets for GSM312448
Status
Public on Mar 23, 2015
Title
1603_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
13992.1758
179.5289
1002
842.3939
10.8085
1003
8.5444
0.1096
1004
12.8857
0.1653
1005
20.3333
0.2609
1006
19.0811
0.2448
1007
33.2836
0.4271
1008
12774.59
163.9065
1009
183.4773
2.3541
1010
826.4211
10.6035
1011
77.1519
0.9899
1012
66.7917
0.857
1013
34.5588
0.4434
1014
9.7955
0.1257
1015
13938.0938
178.835
1016
102.7528
1.3184
1017
6.2162
0.0798
1018
2.8788
0.0369
1019
13.6364
0.175
1020
30.0182
0.3852
Total number of rows:
54359
Table truncated, full table size
1166 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312448.txt.gz
2.3 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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