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Status
Public on Sep 29, 2005
Title
GE Healthcare/Amersham Biosciences CodeLink Human Whole Genome Bioarray
Technology type
spotted oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
GE Healthcare
Manufacture protocol
http://www4.amershambiosciences.com/aptrix/upp01077.nsf/Content/codelink_user_protocols Catalog number
300026
Support
glass
Coating
other
Description
CodeLink Human Whole Genome Bioarray targets most of the known and predictive genes of the human genome as it is described today in the public domain. It is comprised of approximately 55 000 30-mer probes designed to conserved exons across the transcripts of targeted genes. These 55 000 probes represent well annotated, full length, and partial human gene sequences from major public databases. CodeLink Human Whole Genome Bioarray probe sequences were selected from the NCBI UniGene build #165, RefSeq database (January 5, 2004 release) and dbEST database (January 8, 2004 release). Some sequences for design were derived from Incyte LifeSeq™ Gold and Foundation databases.
Web link
http://www4.amershambiosciences.com/aptrix/upp01077.nsf/Content/codelink_human_bioarrays#Whole Submission date
Sep 26, 2005
Last update date
Oct 28, 2014
Contact name
Randall Lockner
E-mail(s)
randall.lockner@ge.com Phone
480-722-2311
Fax
480-722-2334
URL
http://www.codelinkbioarrays.com Organization name
GE Healthcare Life Sciences
Department
Bioinformatics
Street address
7700 S River Parkway
City
Tempe
State/province
AZ
ZIP/Postal code
85284
Country
USA
Samples (1589)
GSM82284 , GSM82285 , GSM82286 , GSM82287 , GSM82288 , GSM82289
GSM82290 ,
GSM82291 ,
GSM82292 ,
GSM82293 ,
GSM82294 ,
GSM82295 ,
GSM82296 ,
GSM82297 ,
GSM82298 ,
GSM82299 ,
GSM82300 ,
GSM82301 ,
GSM82302 ,
GSM82303 ,
GSM82304 ,
GSM82305 ,
GSM82306 ,
GSM82307 ,
GSM82308 ,
GSM82309 ,
GSM82310 ,
GSM82311 ,
GSM82312 ,
GSM82313 ,
GSM82314 ,
GSM82315 ,
GSM82316 ,
GSM82317 ,
GSM82318 ,
GSM82319 ,
GSM82320 ,
GSM82321 ,
GSM82322 ,
GSM82323 ,
GSM82324 ,
GSM82325 ,
GSM82326 ,
GSM82327 ,
GSM82328 ,
GSM82329 ,
GSM82330 ,
GSM82331 ,
GSM82332 ,
GSM82333 ,
GSM82334 ,
GSM82335 ,
GSM82336 ,
GSM82337 ,
GSM82338 ,
GSM82339 ,
GSM82340 ,
GSM82341 ,
GSM82342 ,
GSM82343 ,
GSM82344 ,
GSM82345 ,
GSM82346 ,
GSM82347 ,
GSM82348 ,
GSM82349 ,
GSM82350 ,
GSM82351 ,
GSM82352 ,
GSM82353 ,
GSM82354 ,
GSM82355 ,
GSM82356 ,
GSM82357 ,
GSM82358 ,
GSM82359 ,
GSM82360 ,
GSM82361 ,
GSM82362 ,
GSM82363 ,
GSM82364 ,
GSM82365 ,
GSM82366 ,
GSM82367 ,
GSM82368 ,
GSM82369 ,
GSM82370 ,
GSM82371 ,
GSM82372 ,
GSM82373 ,
GSM82374 ,
GSM82375 ,
GSM82376 ,
GSM82377 ,
GSM82378 ,
GSM82379 ,
GSM93908 ,
GSM93909 ,
GSM93910 ,
GSM93911 ,
GSM93912 ,
GSM93913 ,
GSM93914 ,
GSM93915 ,
GSM93916 ,
GSM93917 ,
GSM93918 ,
GSM93919 ,
GSM100833 ,
GSM108497 ,
GSM108498 ,
GSM108499 ,
GSM108500 ,
GSM108501 ,
GSM108502 ,
GSM108503 ,
GSM108504 ,
GSM108505 ,
GSM108506 ,
GSM108507 ,
GSM108508 ,
GSM109095 ,
GSM109096 ,
GSM109097 ,
GSM109098 ,
GSM109099 ,
GSM109100 ,
GSM109101 ,
GSM109102 ,
GSM109103 ,
GSM109104 ,
GSM109105 ,
GSM109106 ,
GSM114997 ,
GSM114998 ,
GSM114999 ,
GSM115000 ,
GSM115001 ,
GSM115002 ,
GSM115003 ,
GSM115004 ,
GSM115005 ,
GSM115006 ,
GSM115007 ,
GSM115008 ,
GSM115009 ,
GSM115010 ,
GSM115011 ,
GSM115012 ,
GSM115013 ,
GSM115014 ,
GSM115015 ,
GSM115016 ,
GSM115018 ,
GSM115019 ,
GSM118258 ,
GSM118259 ,
GSM118260 ,
GSM118261 ,
GSM118262 ,
GSM118263 ,
GSM118264 ,
GSM118265 ,
GSM118266 ,
GSM118267 ,
GSM118268 ,
GSM118269 ,
GSM121541 ,
GSM123122 ,
GSM123123 ,
GSM123124 ,
GSM123125 ,
GSM123126 ,
GSM123127 ,
GSM123128 ,
GSM123129 ,
GSM123130 ,
GSM123131 ,
GSM123132 ,
GSM123133 ,
GSM123134 ,
GSM123135 ,
GSM123136 ,
GSM123137 ,
GSM123138 ,
GSM123139 ,
GSM123140 ,
GSM123141 ,
GSM123142 ,
GSM123143 ,
GSM123144 ,
GSM123145 ,
GSM123146 ,
GSM123147 ,
GSM123148 ,
GSM123149 ,
GSM123150 ,
GSM123151 ,
GSM123152 ,
GSM123153 ,
GSM123154 ,
GSM123155 ,
GSM123156 ,
GSM123157 ,
GSM123158 ,
GSM123159 ,
GSM123160 ,
GSM123161 ,
GSM123162 ,
GSM123163 ,
GSM123164 ,
GSM123165 ,
GSM123166 ,
GSM123167 ,
GSM123168 ,
GSM123169 ,
GSM123170 ,
GSM123171 ,
GSM123172 ,
GSM123173 ,
GSM123174 ,
GSM123175 ,
GSM123176 ,
GSM123177 ,
GSM123178 ,
GSM123179 ,
GSM123180 ,
GSM123181 ,
GSM123489 ,
GSM128489 ,
GSM128490 ,
GSM128491 ,
GSM128492 ,
GSM128493 ,
GSM128494 ,
GSM128495 ,
GSM128496 ,
GSM128497 ,
GSM128498 ,
GSM128499 ,
GSM128500 ,
GSM128501 ,
GSM128502 ,
GSM128503 ,
GSM128504 ,
GSM128505 ,
GSM128506 ,
GSM128507 ,
GSM128509 ,
GSM128510 ,
GSM128511 ,
GSM128512 ,
GSM128513 ,
GSM128514 ,
GSM128515 ,
GSM128516 ,
GSM128517 ,
GSM128518 ,
GSM128519 ,
GSM128520 ,
GSM128521 ,
GSM128522 ,
GSM128523 ,
GSM128524 ,
GSM128525 ,
GSM128526 ,
GSM128527 ,
GSM128528 ,
GSM128529 ,
GSM128530 ,
GSM128531 ,
GSM128532 ,
GSM128533 ,
GSM128534 ,
GSM128535 ,
GSM128536 ,
GSM128537 ,
GSM128538 ,
GSM128539 ,
GSM128540 ,
GSM128541 ,
GSM128542 ,
GSM128543 ,
GSM128544 ,
GSM128545 ,
GSM128546 ,
GSM128547 ,
GSM128548 ,
GSM128549 ,
GSM128550 ,
GSM128551 ,
GSM128552 ,
GSM128553 ,
GSM128554 ,
GSM128555 ,
GSM128556 ,
GSM128557 ,
GSM128558 ,
GSM128559 ,
GSM128560 ,
GSM128561 ,
GSM128562 ,
GSM128563 ,
GSM128564 ,
GSM128565 ,
GSM128566 ,
GSM128567 ,
GSM128568 ,
GSM128569 ,
GSM128570 ,
GSM128571 ,
GSM128572 ,
GSM128573 ,
GSM128574 ,
GSM128575 ,
GSM128576 ,
GSM128577 ,
GSM128578 ,
GSM128579 ,
GSM128580 ,
GSM128581 ,
GSM128582 ,
GSM128583 ,
GSM128584 ,
GSM128585 ,
GSM128586 ,
GSM128587 ,
GSM128588 ,
GSM128589 ,
GSM128590 ,
GSM128591 ,
GSM128592 ,
GSM128593 ,
GSM128594 ,
GSM128595 ,
GSM128596 ,
GSM128597 ,
GSM128598 ,
GSM128599 ,
GSM128600 ,
GSM128601 ,
GSM128602 ,
GSM128603 ,
GSM128604 ,
GSM128605 ,
GSM128606 ,
GSM128607 ,
GSM128608 ,
GSM128609 ,
GSM128610 ,
GSM128611 ,
GSM128612 ,
GSM128613 ,
GSM128614 ,
GSM128615 ,
GSM128616 ,
GSM128617 ,
GSM128618 ,
GSM128619 ,
GSM128620 ,
GSM128621 ,
GSM128622 ,
GSM128623 ,
GSM128624 ,
GSM128930 ,
GSM128931 ,
GSM128932 ,
GSM128933 ,
GSM128934 ,
GSM128935 ,
GSM128936 ,
GSM128937 ,
GSM128938 ,
GSM128939 ,
GSM128940 ,
GSM128941 ,
GSM128942 ,
GSM128943 ,
GSM128944 ,
GSM128945 ,
GSM128946 ,
GSM128947 ,
GSM128948 ,
GSM128949 ,
GSM130341 ,
GSM130342 ,
GSM130343 ,
GSM130344 ,
GSM130345 ,
GSM130346 ,
GSM130347 ,
GSM130348 ,
GSM130349 ,
GSM130350 ,
GSM130351 ,
GSM130352 ,
GSM130353 ,
GSM130354 ,
GSM130355 ,
GSM130356 ,
GSM130357 ,
GSM130358 ,
GSM130359 ,
GSM130360 ,
GSM139257 ,
GSM139262 ,
GSM139263 ,
GSM139264 ,
GSM139265 ,
GSM139266 ,
GSM139267 ,
GSM144855 ,
GSM144856 ,
GSM144857 ,
GSM144858 ,
GSM152173 ,
GSM152174 ,
GSM154445 ,
GSM154450 ,
GSM154454 ,
GSM154455 ,
GSM154456 ,
GSM154457 ,
GSM154458 ,
GSM154459 ,
GSM154462 ,
GSM154468 ,
GSM154485 ,
GSM154486 ,
GSM176749 ,
GSM176750 ,
GSM176751 ,
GSM207132 ,
GSM213339 ,
GSM213376 ,
GSM213377 ,
GSM213384 ,
GSM213391 ,
GSM213393 ,
GSM213394 ,
GSM213396 ,
GSM213397 ,
GSM213400 ,
GSM213401 ,
GSM213407 ,
GSM213424 ,
GSM213425 ,
GSM213427 ,
GSM213429 ,
GSM213431 ,
GSM213434 ,
GSM213438 ,
GSM213444 ,
GSM213445 ,
GSM213446 ,
GSM237625 ,
GSM237626 ,
GSM237627 ,
GSM237628 ,
GSM237629 ,
GSM237630 ,
GSM237669 ,
GSM237670 ,
GSM237671 ,
GSM240525 ,
GSM240526 ,
GSM240527 ,
GSM240528 ,
GSM240529 ,
GSM240530 ,
GSM240531 ,
GSM240532 ,
GSM240533 ,
GSM240534 ,
GSM240535 ,
GSM240848 ,
GSM244109 ,
GSM244110 ,
GSM244111 ,
GSM244112 ,
GSM244113 ,
GSM244114 ,
GSM244115 ,
GSM244116 ,
GSM244117 ,
GSM244118 ,
GSM244119 ,
GSM244120 ,
GSM244121 ,
GSM244122 ,
GSM244123 ,
GSM244124 ,
GSM254422 ,
GSM254423 ,
GSM254424 ,
GSM254425 ,
GSM254426 ,
GSM254427 ,
GSM254428 ,
GSM254429 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (69)
GSE3578 Activated Cell Death Pathway
GSE4106 Gene expression induced by Nanosecond pulsed electric fields
GSE4609 Transcriptome analysis of Stem Cells from Human Umbilical Cord Blood
GSE4812 Expression data from Daudi cells stimulated with anti-CD40 and/or IL-4 for 6 hr with or without AICAR-pretreatment
GSE4846 Expression data from Daudi cells stimulated with anti-CD40 and/or IL-4 for 6 hr
GSE5108 Whole human genome DNA microarray analysis of gene expression in ectopic vs. eutopic endometrium
GSE5216 GAS41 over-expression in Saos2 Tet-Off cells
GSE5350 MicroArray Quality Control (MAQC) Project
GSE6213 Cervical cancer samples in NIRS
GSE6304 Gene Expression Profiles of Epigenetic treatment in primary breast cancer.
GSE6585 MSX2 enhances the malignant phenotype and associates with Twist 1 expression in human pancreatic cancer
GSE6630 Gene expression profiles in human malignant melanoma cell lines exposed to carbon ions or X-rays
GSE6692 Whole Genome Microarray comparison of two Interferon Beta 1a Pharmaceutical Preparations
GSE7330 MELK Leucine Zipper Kinase is a Key Differentiator between Glioblastoma Multiforme and Pilocytic Astrocytomas
GSE8353 A Mathematical Model for Affymetrix GeneChip Probe Level Data
GSE8604 Epigenetic therapy with hydralazine and magnesium valproate added to chemoradiation in cervical carcinoma.
GSE9332 Study of Leukotriene B4 (LTB4) effect on primary human monocytes transcription profile
GSE9490 The effect of homocysteine on human aortic smooth muscle cells
GSE10064 Gene expression in immortalized B-lymphocytes derived from patients with multiple sclerosis
GSE10123 Progerin-induced changes in gene expression
GSE10145 Azacytidine time course on MCF7 cells
GSE12530 Whole genome expression in meningioma
GSE13857 PSF regulates specific subsets of human mRNAs
GSE14797 Non-invasive detection of molecular biomarkers in subjects with a history of insulin resistance and colorectal adenomas
GSE14808 Two-way communication between endometrial stromal cells and monocytes
GSE15829 Aging of Human Fibroblast
GSE16523 Granulosa cell responses to Gonal vs Menopur
GSE16717 Gene expression profiles in the Leiden Longevity Study
GSE16944 Rapamycin-insensitive up-regulation of MMP2 and other genes in TSC2- deficient LAM-like cells
GSE17470 Global gene expression of NASH patients
GSE18124 A new tick Kunitz type inhibitor, Amblyomin-X, induces tumor cell death by modulating genes related to the cell cycle and targeting the ubiquitin-proteasome system
GSE18464 IFN-a-induced monocyte phenotype in chronic unsuppressed HIV infection
GSE19834 Reciprocal communication between endometrial stromal cells and macrophages
GSE20167 Gene expression profiles of cervical cancers for novel molecular classification
GSE22812 Transcriptomic dysregulation in aggressive and malignant prolactin tumours
GSE24519 Gene expression profiling of patients affected by first acute myocardial infarction (FAMI)
GSE24591 Gene and microRNA expression profiling of patients affected by first acute myocardial infarction (FAMI)
GSE24807 Increased hemoglobin expression in NASH livers
GSE25431 CCN5, a novel transcriptional repressor
GSE26326 Gene expression signatures differ with extent of atherosclerosis in monkey iliac artery
GSE27448 Bladder cancer microarrays
GSE28660 Differential gene expression in uterosacral ligament from patients with recurrent and primary pelvic organ prolapse
GSE29002 The transcriptome of ejaculates used for successful/failed in vitro-fertilization
GSE29136 CCRF-CEM Prednisolone and MG132 treatments at 4h
GSE29763 Gene expression profile associated with a cytostatic does of mifepristone in ovarian cancer cells by microarray analysis
GSE31075 Mutualism between gut microbiota and the host as revealed in a comparative study of breast-fed versus formula-fed infants
GSE32191 Genomic alterations of chromosome 11 induce transcriptome dysregulation in aggressive and malignant prolactin tumours
GSE32403 Multifaceted neuro-regenerative activities of human dental stem cells promote locomotor recovery after complete transection of the rat spinal cord
GSE32902 Analysis of the early transcriptome signature of Nipah virus infection in primary endothelial cells
GSE33133 Analysis of the early transcriptome signature of infection of primary endothelial cells by Nipah virus vs. Nipah virus deleted for the expression of non-structural C protein
GSE33651 Genome-wide gene expression profile of human gastric cancer
GSE35499 Microarray gene expression profiling in central neurocytomas
GSE36007 Effect of EWS/FLI1 and DAX1 silencing on the gene expression profile of the A673 Ewing cell line
GSE37186 Effects of equol on gene expression in female cynomolgus monkey iliac arteries
GSE37187 Estradiol modulates gene expression in the monkey iliac artery
GSE38542 HIV/HCV coinfection activates a type 1 interferon response in monocytes that correlates with cognitive impairment
GSE40007 TNFalpha and IL1beta stimulate differential gene expression in endometrial stromal cells
GSE44172 Microarray profiling of mononuclear peripheral blood cells to identify novel candidate genes related to chemoradiation response in rectal cancer
GSE44187 Expression data from MCF7 Scrambled and SIM2si cells
GSE44736 Dexamethasone Acutely Down-regulates Genes Involved in Steroidogenesis in Stallion Testes
GSE55768 Role of calcium/calmodulin-dependent kinase type IV in podocyte function in lupus nephritis
GSE56739 A PU.1 suppressive target gene, metallothionein-1G, inhibits retinoic acid-induced NB4 cell differentiation
GSE60602 Analysis of gene expression changes when KLF6 is overexpressed in HepG2 cells
GSE79189 The gene expression analysis of human astrocyte exposure to anti-suprabasin antibody: identification of a novel antibody for neuropsychiatric systemic lupus erythematosus
GSE80347 MIA gene family-related signaling in oral squamous cell carcinoma cells
GSE94318 Expression profiling by array in the splenic marginal zone lymphoma (SMZL)
GSE101176 Peritoneal fluid from subjects with endometriosis regulates gene expression in cultured endometrial cells
GSE112215 Transcriptional changes of influenza A/Hong Kong/1/68-H3N2 (HK68) infected A549 lung epithelial cells
GSE120350 Sex-related differences in lactotroph tumor aggressiveness are associated with a specific gene-expression signature and genome instability
Relations Alternative to
GPL11010 Alternative to
GPL8060 Alternative to
GPL18134 ([DISCOVERY PROBE_TYPE])
Data table header descriptions ID LOGICAL_ROW The logical row position of the spot.
LOGICAL_COL The logical column position of the spot.
PROBE_NAME The unique probe identifier. Each Probe Name is specific for a given oligonucleotide probe and is the primary identifier.
PROBE_TYPE A classifier indicating the functional role of the oligonucleotide probe.
PUB_PROBE_TARGETS A classifier describing the oligonucleotide probe to target relationship. SINGLE - the oligo uniquely targets a single transcript in the public domain. MULTIPLE - the oligo targets more than one transcript in the public domain. DUPLICATE - more than one oligo exists on the bioarray that target the same transcript.
SPOT_ID An identifier for oligonucleotide probes that do not have a corresponding public reference.
GB_LIST NCBI GenBank accession numbers. Multiple accessions are listed for probes having more than one target transcript (the first accession in the list is the primary accession assigned to the target sequence)
GI_LIST NCBI GenBank GI numbers. Multiple GI numbers are listed for probes having more than one target transcript (the first GI number in the list is the primary GI assigned to the target sequence)
56448 3457 Kbytes .Supplementary data files not provided
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