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GEO accession:
Sample GSM312449
Query DataSets for GSM312449
Status
Public on Mar 23, 2015
Title
1603_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
17233.2754
208.1562
1002
807.3469
9.7517
1003
4.62
0.0558
1004
20.0526
0.2422
1005
21.4792
0.2594
1006
33.0182
0.3988
1007
35.4412
0.4281
1008
17175.6328
207.4599
1009
225.1555
2.7196
1010
894.8283
10.8084
1011
93.7654
1.1326
1012
86.726
1.0475
1013
44.4028
0.5363
1014
28.5593
0.345
1015
16129.6934
194.8263
1016
180.1923
2.1765
1017
16.625
0.2008
1018
10.6923
0.1291
1019
19.439
0.2348
1020
56.7813
0.6858
Total number of rows:
54359
Table truncated, full table size
1168 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312449.txt.gz
2.3 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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