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GEO accession:
Sample GSM312467
Query DataSets for GSM312467
Status
Public on Sep 28, 2010
Title
2035_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Sep 28, 2010
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE20167
Gene expression profiles of cervical cancers for novel molecular classification
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
10385.7383
85.8897
1002
957.2963
7.9168
1003
1.7882
0.0148
1004
2.2892
0.0189
1005
8.8
0.0728
1006
26.7778
0.2215
1007
43.2821
0.3579
1008
10040.0244
83.0306
1009
475.3062
3.9308
1010
427.5699
3.536
1011
162.587
1.3446
1012
50
0.4135
1013
24.8214
0.2053
1014
83.2561
0.6885
1015
10517.0146
86.9753
1016
47.2025
0.3904
1017
26.9344
0.2227
1018
6.9091
0.0571
1019
6.6136
0.0547
1020
26.0274
0.2152
Total number of rows:
54359
Table truncated, full table size
1174 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312467.txt.gz
2.3 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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