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GEO accession:
Sample GSM312468
Query DataSets for GSM312468
Status
Public on Mar 23, 2015
Title
2313_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, chemotherapy + carbon-ion radiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemotherapy + carbon-ion radiotherapy
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
6535.3789
125.0457
1002
346.9681
6.6388
1003
23.9796
0.4588
1004
26.6071
0.5091
1005
20.8727
0.3994
1006
26.0508
0.4984
1007
21.8333
0.4178
1008
6638.2051
127.0131
1009
149.5833
2.8621
1010
303.25
5.8023
1011
44.1579
0.8449
1012
84.8312
1.6231
1013
29.5493
0.5654
1014
20.9615
0.4011
1015
6374.0303
121.9585
1016
44.4648
0.8508
1017
25.5538
0.4889
1018
24.9434
0.4773
1019
16.2917
0.3117
1020
27.6034
0.5282
Total number of rows:
54359
Table truncated, full table size
1167 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312468.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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