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GEO accession:
Sample GSM312470
Query DataSets for GSM312470
Status
Public on Sep 28, 2010
Title
2316_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, carbon-ion radiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, carbon-ion radiotherapy
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Sep 28, 2010
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE20167
Gene expression profiles of cervical cancers for novel molecular classification
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
9538.6045
183.2803
1002
266.7545
5.1256
1003
15.3208
0.2944
1004
19.4054
0.3729
1005
20.193
0.388
1006
32.1184
0.6171
1007
49.37
0.9486
1008
10321.0645
198.315
1009
201.5428
3.8726
1010
169.663
3.26
1011
130.6162
2.5097
1012
29.5974
0.5687
1013
38.7625
0.7448
1014
21.1833
0.407
1015
10190.2598
195.8016
1016
41.2279
0.7922
1017
34.2597
0.6583
1018
18.5
0.3555
1019
13.8983
0.2671
1020
16.4925
0.3169
Total number of rows:
54359
Table truncated, full table size
1165 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312470.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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