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GEO accession:
Sample GSM312473
Query DataSets for GSM312473
Status
Public on Sep 28, 2010
Title
2317_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Sep 28, 2010
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE20167
Gene expression profiles of cervical cancers for novel molecular classification
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
6740.4219
116.4684
1002
364.4783
6.2979
1003
21.3043
0.3681
1004
32.5645
0.5627
1005
20.7193
0.358
1006
29.2667
0.5057
1007
39.4219
0.6812
1008
6669.0405
115.235
1009
216.046
3.7331
1010
246.9756
4.2675
1011
67.3462
1.1637
1012
47.8261
0.8264
1013
25.1077
0.4338
1014
17.9778
0.3106
1015
6744.5884
116.5404
1016
49.4384
0.8542
1017
28.4143
0.491
1018
28.3929
0.4906
1019
22.7818
0.3936
1020
21.06
0.3639
Total number of rows:
54359
Table truncated, full table size
1167 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312473.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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