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GEO accession:
Sample GSM312475
Query DataSets for GSM312475
Status
Public on Mar 23, 2015
Title
2318_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
6257.6201
118.9314
1002
241.0824
4.582
1003
27.6545
0.5256
1004
29.7931
0.5662
1005
23.431
0.4453
1006
36.3906
0.6916
1007
41.0694
0.7806
1008
6451.3135
122.6127
1009
161.5976
3.0713
1010
175.64
3.3382
1011
106.9512
2.0327
1012
34.6667
0.6589
1013
24.3385
0.4626
1014
29.0147
0.5514
1015
6291.5938
119.5771
1016
45.8889
0.8722
1017
51.2857
0.9747
1018
24.0877
0.4578
1019
21.8333
0.415
1020
28.6
0.5436
Total number of rows:
54359
Table truncated, full table size
1166 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312475.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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