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GEO accession:
Sample GSM312476
Query DataSets for GSM312476
Status
Public on Sep 28, 2010
Title
2319_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, carbon-ion radiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, carbon-ion radiotherapy
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Sep 28, 2010
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE20167
Gene expression profiles of cervical cancers for novel molecular classification
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
7407.2051
125.7912
1002
273.202
4.6396
1003
25.9565
0.4408
1004
33.6389
0.5713
1005
24.3235
0.4131
1006
37.5067
0.6369
1007
32.2279
0.5473
1008
7665.3472
130.175
1009
179.3434
3.0457
1010
214.1444
3.6367
1011
65.4176
1.1109
1012
44.1053
0.749
1013
32.125
0.5456
1014
53.125
0.9022
1015
7670.2119
130.2577
1016
95.8
1.6269
1017
38.9867
0.6621
1018
18.2143
0.3093
1019
19.6364
0.3335
1020
28.403
0.4823
Total number of rows:
54359
Table truncated, full table size
1168 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312476.txt.gz
2.3 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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