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GEO accession:
Sample GSM312480
Query DataSets for GSM312480
Status
Public on Mar 23, 2015
Title
2516_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, chemoradiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemoradiotherapy
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
6092.5806
130.3862
1002
194.9529
4.1722
1003
25.3333
0.5422
1004
33.7903
0.7231
1005
25.8413
0.553
1006
26.4559
0.5662
1007
31.0294
0.6641
1008
6459.2646
138.2335
1009
302.1954
6.4672
1010
134.962
2.8883
1011
74.8701
1.6023
1012
35.1897
0.7531
1013
24.5484
0.5254
1014
45.2973
0.9694
1015
6421.9097
137.4341
1016
61.4177
1.3144
1017
24.6812
0.5282
1018
22.983
0.4919
1019
19.7692
0.4231
1020
24.3913
0.522
Total number of rows:
54359
Table truncated, full table size
1163 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312480.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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