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GEO accession:
Sample GSM312481
Query DataSets for GSM312481
Status
Public on Mar 23, 2015
Title
2516_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, chemoradiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemoradiotherapy
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
6163.1875
126.9393
1002
187.253
3.8567
1003
47.0298
0.9686
1004
28.9848
0.597
1005
25
0.5149
1006
24.7069
0.5089
1007
40.5571
0.8353
1008
6263.1631
128.9984
1009
223.9438
4.6124
1010
131.7403
2.7134
1011
64.8026
1.3347
1012
31.5455
0.6497
1013
29.4865
0.6073
1014
47.7397
0.9833
1015
6440.5356
132.6517
1016
53.4667
1.1012
1017
20.541
0.4231
1018
24.0152
0.4946
1019
16.0233
0.33
1020
25.029
0.5155
Total number of rows:
54359
Table truncated, full table size
1164 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312481.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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