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GEO accession:
Sample GSM312491
Query DataSets for GSM312491
Status
Public on Mar 23, 2015
Title
2897_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
5814.1895
123.3339
1002
231.5412
4.9116
1003
22.5306
0.4779
1004
22.54
0.4781
1005
18.66
0.3958
1006
25.2241
0.5351
1007
33.7971
0.7169
1008
5766.4038
122.3203
1009
366.2717
7.7696
1010
140.3636
2.9775
1011
69.8875
1.4825
1012
29.1356
0.618
1013
22.0758
0.4683
1014
23.4407
0.4972
1015
5780.1685
122.6122
1016
29.1029
0.6173
1017
23.0968
0.4899
1018
19.1321
0.4058
1019
14.48
0.3072
1020
19.1311
0.4058
Total number of rows:
54359
Table truncated, full table size
1164 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312491.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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