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GEO accession:
Sample GSM314290
Query DataSets for GSM314290
Status
Public on Sep 28, 2010
Title
785_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, chemoradiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemoradiotherapy
Data processing
global median normalization
Submission date
Aug 21, 2008
Last update date
Sep 28, 2010
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE20167
Gene expression profiles of cervical cancers for novel molecular classification
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
18997.3438
153.4196
1002
942
7.6074
1003
11.7049
0.0945
1004
14.35
0.1159
1005
20.6957
0.1671
1006
35.9672
0.2905
1007
30.0185
0.2424
1008
16757.1289
135.328
1009
236.8353
1.9126
1010
819.5517
6.6186
1011
128.8182
1.0403
1012
254.4744
2.0551
1013
69.7162
0.563
1014
27.8113
0.2246
1015
16514.2031
133.3662
1016
133.961
1.0818
1017
28.2692
0.2283
1018
17.5122
0.1414
1019
21.6
0.1744
1020
50.8806
0.4109
Total number of rows:
54359
Table truncated, full table size
1179 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM314290.txt.gz
2.4 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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