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GEO accession:
Sample GSM314292
Query DataSets for GSM314292
Status
Public on Sep 28, 2010
Title
1991_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, chemoradiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemoradiotherapy
Data processing
global median normalization
Submission date
Aug 21, 2008
Last update date
Sep 28, 2010
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE20167
Gene expression profiles of cervical cancers for novel molecular classification
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
18582.207
147.2957
1002
1102.8866
8.7423
1003
7.2697
0.0576
1004
13.1489
0.1042
1005
22
0.1744
1006
29.6038
0.2347
1007
25.1702
0.1995
1008
17325.709
137.3358
1009
319.0127
2.5287
1010
976.2532
7.7385
1011
150.5891
1.1937
1012
229.5891
1.8199
1013
85.2647
0.6759
1014
283.7027
2.2488
1015
16549.7969
131.1853
1016
124.2267
0.9847
1017
23.16
0.1836
1018
8.5904
0.0681
1019
18.9189
0.15
1020
35.6471
0.2826
Total number of rows:
54359
Table truncated, full table size
1178 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM314292.txt.gz
2.3 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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